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TIG v1.0 Metadata Check for SEND Domain Specification Table Beta 2.1

Metadata check macro is applied and detected no issues. This notice is provided as a visual reminder. It will be removed during final publication. Release Notes

Variable NameVariable LabelTypeControlled Terms, Codelist, or FormatRoleCDISC NotesCore
STUDYIDStudy IdentifierChar
IdentifierUnique identifier for a study.Req
DOMAINDomain AbbreviationCharLBIdentifierTwo-character abbreviation for the domain.Req
USUBJIDUnique Subject IdentifierChar
IdentifierIdentifier used to uniquely identify a subject across all studies for all application or submissions involving the product. Either USUBJID or POOLID must be populated.Exp
POOLIDPool IdentifierChar
IdentifierIdentifier used for pooling subjects to assign a single finding to multiple subjects. If POOLID is entered, POOLDEF records must exist for each subject and the USUBJID must be null. Either USUBJID or POOLID must be populated.Perm
LBSEQSequence NumberNum
IdentifierThe sequence number must be unique for each record within a USUBJID or POOLID, whichever applies for the record.Req
LBGRPIDGroup IdentifierChar
IdentifierUsed to tie together a block of related records in a single domain for a subject or pool. This is not the dosing group number.Perm
LBREFIDSpecimen IdentifierChar
IdentifierInternal or external specimen identifier. Example: 1009570101.Perm
LBSPIDApplicant-Defined IdentifierChar
IdentifierApplicant-defined reference identifier. Example: Line number on the Lab page.Perm
LBTESTCDLab Test or Examination Short NameChar(LBTESTCD)TopicShort name of the measurement, test, or examination described in LBTEST. It can be used as a column name when converting a dataset from a vertical to a horizontal format. The value in LBTESTCD cannot be longer than 8 characters, nor can it start with a number (e.g., "1TEST" is not valid). LBTESTCD cannot contain characters other than letters, numbers, or underscores. Examples: ALT, LDH.Req
LBTESTLab Test or Examination NameChar(LBTEST)Synonym QualifierLong name for LBTESTCD. The value in LBTEST cannot be longer than 40 characters. Examples: Alanine Aminotransferase, Lactate Dehydrogenase.Req
LBCATCategory for Lab TestChar
Grouping QualifierUsed to define a category of the lab test performed. Examples: URINALYSIS, CLINICAL CHEMISTRY, HEMATOLOGY, etc.Exp
LBSCATSubcategory for Lab TestChar
Grouping QualifierA further categorization of a test category. Examples: DIFFERENTIAL, LIVER FUNCTION, ELECTROLYTES.Perm
LBORRESResult or Findings as CollectedChar
Result QualifierResult of the measurement or finding as originally received or collected.Exp
LBORRESUUnit of the Original ResultChar(UNIT)Variable QualifierThe unit for the original result. The unit of the original result should be mapped to a synonymous unit on the Controlled Terminology (http://www.cdisc.org/terminology) list.Exp
LBORNRLOReference Range Lower Limit-Orig UnitChar
Variable QualifierLower end of reference range used at the time of collection for continuous measurements in original units. Should be populated only for continuous results.Perm
LBORNRHIReference Range Upper Limit-Orig UnitChar
Variable QualifierUpper end of reference range used at the time of collection for continuous measurements in original units. Should be populated only for continuous results.Perm
LBSTRESCStandardized Result in Character FormatChar
Result QualifierContains the result value for all findings, copied or derived from LBORRES, in a standard format or standard units. LBSTRESC should store all results or findings in character format; if results are numeric, they should also be submitted in numeric format in LBSTRESN. For example, if a test has results NONE, NEG, and NEGATIVE in LBORRES and these results effectively have the same meaning, they could be represented in standard format in LBSTRESC as NEGATIVE. For other examples, see general assumptions.Exp
LBSTRESNStandardized Result in Numeric FormatNum
Result QualifierUsed for numeric results or findings in standard format; contains the numeric form of LBSTRESC. LBSTRESN should store all numeric test results or findings.Exp
LBSTRESUUnit of the Standardized ResultChar(UNIT)Variable QualifierStandardized unit used for LBSTRESC and LBSTRESN.Exp
LBSTNRLOReference Range Lower Limit-Std UnitNum
Variable QualifierLower end of reference range for continuous measurements in standardized units. Should be populated only for continuous results.Perm
LBSTNRHIReference Range Upper Limit-Std UnitNum
Variable QualifierUpper end of reference range for continuous measurements in standardized units. Should be populated only for continuous results.Perm
LBSTNRCReference Range for Char Rslt-Std UnitChar
Variable QualifierFor normal range values that are character in ordinal scale or if categorical ranges were supplied (e.g., -1 to +1; NEGATIVE TO TRACE).Perm
LBNRINDReference Range IndicatorChar
Variable QualifierIndicates where value falls with respect to reference range defined by LBORNRLO and LBORNRHI, LBSTRNRLO and LBSTNRHI, or by LBSTNRC. Examples: NORMAL, ABNORMAL, HIGH, LOW.
Applicants should specify in the study metadata (Comments column in the data definition file) whether LBNRIND refers to the original or standard reference ranges and results. Should not be used to indicate biological significance.
Perm
LBSTATCompletion StatusChar(ND)Record QualifierUsed to indicate when a test is not done or result is missing. Should be null if a result exists in LBORRES.Perm
LBREASNDReason Not DoneChar
Record QualifierDescribes why LBSTAT is NOT DONE, such as BROKEN EQUIPMENT or SPECIMEN LOST.Perm
LBNAMLaboratory NameChar
Record QualifierName or identifier of the laboratory or vendor that provided the test results.Perm
LBSPECSpecimen Material TypeChar(SPEC)Record QualifierDefines the type of specimen analyzed to obtain the measurement or finding. Examples: WHOLE BLOOD, SERUM, PLASMA, URINE, LIVER, HEART.Exp
LBANTREGAnatomical Region of SpecimenChar
Variable QualifierDefines the specific anatomical or biological region of a tissue, organ specimen, or the region from which the specimen was obtained, such as a section or part of what is defined in the LBSPEC variable. If the anatomical region is not included in the specimen description LBSPEC, it may be included in this variable. This field can be a combination of terms where needed. This field can be null if not applicable. Examples: CORTEX, MEDULLA, MUCOSA, SEROSA, ISLET, ZONA FASICULATA, ZONA RETICULARIS, CRANIAL, MEDIAN, ACCESSORY, SPINAL, LUMBAR, FRONTAL.Perm
LBSPCCNDSpecimen ConditionChar
Record QualifierFree or standardized text describing the condition of the specimen. Examples: HEMOLYZED, ICTERIC, LIPEMIC.Perm
LBSPCUFLSpecimen Usability for the TestChar(NY)Record QualifierDescribes the usability of the specimen for the test. Should be N if the specimen is not usable; otherwise it should be null.Perm
LBLOCSpecimen Collection LocationChar
Record QualifierLocation relevant to the collection of specimen for the measurement.Perm
LBLATSpecimen Laterality within SubjectChar(LAT)Variable QualifierQualifier for laterality of the specimen within the subject for paired specimens. Examples: LEFT, RIGHT, BILATERAL.Perm
LBDIRSpecimen Directionality within SubjectChar(DIR)Variable QualifierQualifier for directionality of the specimen within the subject. Examples: DORSAL, PROXIMAL.Perm
LBPORTOTPortion or TotalityChar(PORTOT)Variable QualifierQualifier for anatomical location or specimen further detailing the portion or totality, which means arrangement of, or apportioning of. Examples: ENTIRE, SINGLE, SEGMENT, MANY.Perm
LBMETHODMethod of Test or ExaminationChar
Record QualifierMethod of the test or examination. Examples: EIA (Enzyme Immunoassay), ELECTROPHORESIS, DIPSTICK.Exp
LBBLFLBaseline FlagChar(NY)Record QualifierA baseline indicator may be used to calculate differences or changes from baseline. Value should be Y or null. The baseline flag is applicant defined.Exp
LBFASTFasting StatusChar(NY)Record QualifierIndicator used to identify fasting status. The value should be Y or null.Perm
LBDRVFLDerived FlagChar(NY)Record QualifierUsed to indicate a derived record. The value should be Y or null. Records that represent the average of other records, or are not as originally received or collected are examples of records that might be derived for the submission datasets.Perm
LBTOXToxicityChar
Variable QualifierDescription of toxicity quantified by LBTOXGR. The applicant is expected to provide the name and version of the scale used to map the terms, utilizing the data definition file external codelist attributes.Perm
LBTOXGRStandard Toxicity GradeChar
Record QualifierRecords toxicity grade value using a standard toxicity scale (such as the NCI CTCAE). If value is from a numeric scale, represent only the number (e.g., "2" and not "Grade 2"). The applicant is expected to provide the name of the scale and version used to map the terms, utilizing the data definition file external codelist attributes.Perm
LBEXCLFLExclusion FlagChar(NY)Record Qualifier"Y" if the result should be excluded from all calculations, otherwise null.Perm
LBREASEXReason for ExclusionChar
Record QualifierThe reason the result should be excluded from all calculations. Used only when LBEXCLFL is "Y".Perm
LBUSCHFLUnscheduled FlagChar(NY)Record QualifierIndicates whether the timing of the specimen collection was unscheduled. If a specimen collection was performed based upon a schedule defined in the protocol, this flag should be null. Expected values are "Y" or null.Exp
VISITDYPlanned Study Day of CollectionNum
TimingPlanned study day of specimen collection. Should be an integer.Perm
LBDTCDate/Time of Specimen CollectionCharISO 8601 datetime or intervalTimingDate/Time of specimen collection, in IS0 8601 format.Exp
LBENDTCEnd Date/Time of Specimen CollectionCharISO 8601 datetime or intervalTimingDate/Time of the end of specimen collection in ISO 8601 format. Should be populated only for continuous sample collection.Perm
LBDYStudy Day of Specimen CollectionNum
TimingStudy day of specimen collection, in integer days. The algorithm for calculations must be relative to the applicant-defined RFSTDTC variable in the Demographics (DM) domain.Perm
LBENDYStudy Day of End of Specimen CollectionNum
TimingStudy day of the end of specimen collection, in integer days. The algorithm for calculations must be relative to the applicant-defined RFSTDTC variable in the Demographics (DM) domain.Perm
LBNOMDYNominal Study Day for TabulationsNum
TimingNominal study day used for grouping records for specimen collections that may occur on different days into a single reported study day. Should be an integer.Exp
LBNOMLBLLabel for Nominal Study DayChar
TimingA label for a given value of LBNOMDY as presented in the study report. Examples: Week 4, Day 28, Terminal Sac.Perm
LBTPTPlanned Time Point NameChar
TimingText Description of time when specimen should be taken. This may be represented as an elapsed time relative to a fixed reference point, such as time of last dose. See LBTPTNUM and LBTPTREF. Examples: Start, 5 min post.Perm
LBTPTNUMPlanned Time Point NumberNum
TimingNumerical version of LBTPT to aid in sorting.Perm
LBELTMPlanned Elapsed Time from Time Point RefCharISO 8601 durationTimingElapsed time (in ISO 8601 format) relative to a planned fixed reference (LBTPTREF). This variable is useful where there are repetitive measures. Not a clock time or a date time variable. Represented as an ISO 8601 duration. Examples: "- P15M" to represent the period of 15 minutes prior to the reference point indicated by LBTPTREF, or "P8H" to represent the period of 8 hours after the reference point indicated by LBTPTREF.Perm
LBTPTREFTime Point ReferenceChar
TimingName of the fixed reference point referred to by LBELTM, if used for LBTPTNUM, and LBTPT. It is recommended that LBTPTREF be as descriptive as possible so the reference time point can be inferred without looking at other variables. Examples: PREVIOUS DOSE, PREVIOUS MEAL.Perm
LBRFTDTCDate/Time of Reference Time PointCharISO 8601 datetime or intervalTimingDate/Time of the reference time point, LBTPTREF.Perm

Assumptions

  1. The Laboratory Test Results (LB) domain captures laboratory data collected by the lab executing the study or data received from a central provider.
  2. Results:
    1. LBSTRESC (or corresponding numeric LBSTRESN) is used to represent standardized format of original results. For instance, original results such as "NEG" or "NEGATIVE" may be represented in standard format as "NEGATIVE" in LBSTRESC.
    2. LBORNRLO and LBORNRHI represent the reference range in original units, and LBSTNRLO and LBSTNRHI represent the reference range in standard units. These variables are Permissible, since many tests may not have well-established ranges or the ranges would not apply.
    3. For lab tests that do not have continuous numeric results (e.g., urine protein as measured by dipstick, descriptive tests such as urine color), LBSTNRC could be populated either with normal character range values in an ordinal scale (e.g., "NEGATIVE to TRACE") or a delimited set of values that are considered to be normal (e.g., "YELLOW", "AMBER").
    4. LBSTAT and LBREASND are Permissible and are used to indicate when a test was not completed. In these cases, LBSTAT should contain "NOT DONE"; LBORRES, LBSTRESC, and LBSTRESN should be null. LBREASND should contain the reason for not completing the test.
  3. Specimen collection location - organ/tissue definition:
    1. The location of specimen collection for a subject is described by the following fields: LBSPEC, LBANTREG, and LBLOC.
    2. LBSPEC is Expected and defines the specimen type or the base organ or tissue analyzed.
    3. LBANTREG is Permissible and further specifies a part or section of the organ/tissue specified in LBSPEC. Examples include the cortex of the kidney or a study-specific sectioning of the organ (e.g., top section of left liver lobe).
    4. LBLOC is permissible to specify location of specimen collection. If a sample of blood is taken, LBLOC may be used to indicate the location of sampling (e.g., jugular vein, portal vein). Another example could be if the specimen type (LBSPEC) is "BONE MARROW"; LBLOC could be "Femoral" or "Sternal".
  4. Timing variables:
    1. Information about the time of collection for any observation is needed to identify the record. LBDTC is expected, and the data will, in most cases, contain LBDTC, LBDY, or both. However, some studies (e.g., legacy studies) may not collect LBDTC or LBDY; in such cases, LBNOMDY must be populated.
    2. For lab tests where the specimen is collected over time (e.g., 24-hour urine collection), the start date/time of the collection goes into LBDTC and the end date/time of collection goes into LBENDTC.
  5. Pooling:
    1. For lab results that correspond to samples pooled from different subjects, POOLID will be populated with a unique number identifying the pool.
    2. One record will exist for each pool in LB. Populating POOLID will mark the result as being collected at a pool level and not on a subject level.
  6. Other assumptions:
    1. A value derived by a lab according to their procedures is considered as having an origin value of collected, rather than derived.
    2. A single reference range can be included for either standard results (LBSTNRLO and LBSTNRHI) or original results (LBORNRLO and LBORNRHI), but not both. LBNRIND is used as a reference range indicator for the range being used.

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