Page History

This example shows the definition and results for a single analysis, "Comparison of Age by Treatment", including the definitions of the grouping factor and method referenced by the analysis. This example illustrates the use of just the groupingId attribute of the ResultGroup class to associate a result with a grouping factor that does not generate a result for each group in the grouping factor.

Xfancy

class	rowcaps

Lines 1-1819:	Show the definition of the single subject grouping factors factor referenced by the analysis: the "Treatment" subject grouping factor, which has 3 groups: "Placebo", "Xanomeline Low Dose", and "Xanomeline High Dose". This grouping factor is not data-driven (dataDriven = false on lines 3line 6).
Lines 1921-2729:	Show the definition of the method referenced by the analysis, "Analysis of variance group comparison for a continuous variable", which has a single operation ("P-value").
Lines 2931-3840:	Show the definition of the analysis: Lines 3234-3335: Show that this is an analysis of the AGE variable in the ADSL dataset. Line 3436: Shows the reference to the "Analysis of variance group comparison for a continuous variable" method. Lines 3537-3840: Show the reference to the single grouping factor, which is marked as not producing a result for each group in the grouping factor (resultsByGroup = false, shown on line 3739).
Lines 4041-4446	Show the single result for the analysis, represented as an instance of the OperationResult class containing: The identifier value of the statistical operation performed, which is in the the operationId attribute. In the resultGroups attribute, a reference to the only the grouping factor group associated with the result (indicated by the value of the groupingId attribute). The association to the "Treatment" grouping factor can be used as an indication that this is a treatment-related result. The raw result value in the rawValue attribute, and In the formattedValue attribute, the result value formatted according to the pattern specified in the resultPattern attribute of the operation referenced by the operationId value. The specified patterns are pattern is shown on row 2628.

Code Block

title	YAML Example
linenumbers	true

analysisGroupings:
- id: AnlsGrouping_01_Trt
  dataDrivenname: falseTreatment
  labelgroupingDataset: TreatmentADSL
  groupingVariable: TRT01A
  dataDriven: false
  groups:
  - id: AnlsGrouping_01_Trt_1
    labelname: Placebo
    order: 1
    ...
  - id: AnlsGrouping_01_Trt_2
    labelname: Xanomeline Low Dose
    order: 2 
    ...
  - id: AnlsGrouping_01_Trt_3
    labelname: Xanomeline High Dose
    order: 3 
    ...
methods:
- id: Mth04_ContVar_Comp_Anova
  name: Analysis of variance group comparison for a continuous variable
  operations:
  - id: Mth04_ContVar_Comp_Anova_1_pval
    name: P-value
    label: p-value
    order: 1
    resultPattern: X.XXXX
  ...
analyses:
- id: An03_01_Age_Comp_ByTrt
  name: Comparison of Age by Treatment
  version: 1
  dataset: ADSL
  variable: AGE
  methodId: Mth04_ContVar_Comp_Anova
  orderedGroupings:
  - order: 1
    resultsByGroup: false
    groupingId: AnlsGrouping_01_Trt
  results:
  - operationId: Mth04_ContVar_Comp_Anova_1_pval
    resultGroups:
    - groupingId: AnlsGrouping_01_Trt
    rawValue: '0.5934357753'
    formattedValue: '0.5934'
  ...
...

The results result for this analysis could be represented in tabular format as shown in the following table , where the groupingId and groupId values from the 2 two instances of the ResultGroup class found in the resultGroups attribute for each result are represented in separate pairs of columns ("groupingId1"/"groupId1" and "groupingId2"/"groupId2") so that each result is represented on a single row:

Dataset2

operationId	groupingId1	groupId1	groupingId2	groupId2	rawValue	formattedValue
Mth01_CatVar_Summ_ByGrp_1_n	AnlsGrouping_01_Trt	AnlsGrouping_01_Trt_1	AnlsGrouping_02_Sex	AnlsGrouping_02_Sex_1	33	33
Mth01_CatVar_Summ_ByGrp_1_n	AnlsGrouping_01_Trt	AnlsGrouping_01_Trt_1	AnlsGrouping_02_Sex	AnlsGrouping_02_Sex_2	53	53
Mth01_CatVar_Summ_ByGrp_1_n	AnlsGrouping_01_Trt	AnlsGrouping_01_Trt_2	AnlsGrouping_02_Sex	AnlsGrouping_02_Sex_1	34	34
Mth01_CatVar_Summ_ByGrp_1_n	AnlsGrouping_01_Trt	AnlsGrouping_01_Trt_2	AnlsGrouping_02_Sex	AnlsGrouping_02_Sex_2	50	50
Mth01_CatVar_Summ_ByGrp_1_n	AnlsGrouping_01_Trt	AnlsGrouping_01_Trt_3	AnlsGrouping_02_Sex	AnlsGrouping_02_Sex_1	44	44
Mth01_CatVar_Summ_ByGrp_1_n	AnlsGrouping_01_Trt	AnlsGrouping_01_Trt_3	AnlsGrouping_02_Sex	AnlsGrouping_02_Sex_2	40	40
Mth01_CatVar_Summ_ByGrp_2_pct	AnlsGrouping_01_Trt	AnlsGrouping_01_Trt_1	AnlsGrouping_02_Sex	AnlsGrouping_02_Sex_1	38.3720930232558	( 38.4)
Mth01_CatVar_Summ_ByGrp_2_pct	AnlsGrouping_01_Trt	AnlsGrouping_01_Trt_1	AnlsGrouping_02_Sex	AnlsGrouping_02_Sex_2	61.6279069767442	( 61.6)
Mth01_CatVar_Summ_ByGrp_2_pct	AnlsGrouping_01_Trt	AnlsGrouping_01_Trt_2	AnlsGrouping_02_Sex	AnlsGrouping_02_Sex_1	40.4761904761905	( 40.5)
Mth01_CatVar_Summ_ByGrp_2_pct	AnlsGrouping_01_Trt	AnlsGrouping_01_Trt_2	AnlsGrouping_02_Sex	AnlsGrouping_02_Sex_2	59.5238095238095	( 59.5)
Mth01_CatVar_Summ_ByGrp_2_pct	AnlsGrouping_01_Trt	AnlsGrouping_01_Trt_3	AnlsGrouping_02_Sex	AnlsGrouping_02_Sex_1	52.3809523809524	( 52.4)
Mth01_CatVar_Summ_ByGrp_2_pct	AnlsGrouping_01_Trt	AnlsGrouping_01_Trt_3	AnlsGrouping_02_Sex	AnlsGrouping_02_Sex_2	47.6190476190476	( 47.6)

value of the id attribute of the analysis is shown in the "analysisId" column:

Dataset2

analysisId	operationId	groupingId	rawValue	formattedValue
An03_01_Age_Comp_ByTrt	Mth04_ContVar_Comp_Anova_1_pval	AnlsGrouping_01_Trt	0.5934357753	0.5934

Alternatively, to aid readability, each of the identifier values could be used to retrieve and include additional the name or label (or any other descriptive information) from the definitions of the operations, grouping factors, and groupsoperation and grouping factor:

Dataset2

analysisId	operationId	operation_label	groupingId1groupingId	grouping_label1	groupId1	group_label1	groupingId2	grouping_label2	groupId2	group_label2	name	rawValue	formattedValue
Mth01_CatVar_Summ_ByGrp_1_n	n	AnlsGrouping_01_Trt	Treatment	AnlsGrouping_01_Trt_1	Placebo	AnlsGrouping_02_Sex	Sex	AnlsGrouping_02_Sex_1	Male	33	33
An03_01_Age_Comp_ByTrt	Mth04_ContVar_Comp_Anova_1_pval	p-value	Mth01_CatVar_Summ_ByGrp_1_n	n	AnlsGrouping_01_Trt	Treatment	AnlsGrouping_01_Trt_1	Placebo	AnlsGrouping_02_Sex	Sex	AnlsGrouping_02_Sex_2	Female	53	53
Mth01_CatVar_Summ_ByGrp_1_n	n	AnlsGrouping_01_Trt	Treatment	AnlsGrouping_01_Trt_2	Xanomeline Low Dose	AnlsGrouping_02_Sex	Sex	AnlsGrouping_02_Sex_1	Male	34	34
Mth01_CatVar_Summ_ByGrp_1_n	n	AnlsGrouping_01_Trt	Treatment	AnlsGrouping_01_Trt_2	Xanomeline Low Dose	AnlsGrouping_02_Sex	Sex	AnlsGrouping_02_Sex_2	Female	50	50
Mth01_CatVar_Summ_ByGrp_1_n	n	AnlsGrouping_01_Trt	Treatment	AnlsGrouping_01_Trt_3	Xanomeline High Dose	AnlsGrouping_02_Sex	Sex	AnlsGrouping_02_Sex_1	Male	44	44
Mth01_CatVar_Summ_ByGrp_1_n	n	AnlsGrouping_01_Trt	Treatment	AnlsGrouping_01_Trt_3	Xanomeline High Dose	AnlsGrouping_02_Sex	Sex	AnlsGrouping_02_Sex_2	Female	40	40
Mth01_CatVar_Summ_ByGrp_2_pct	%	AnlsGrouping_01_Trt	Treatment	AnlsGrouping_01_Trt_1	Placebo	AnlsGrouping_02_Sex	Sex	AnlsGrouping_02_Sex_1	Male	38.3720930232558	( 38.4)
Mth01_CatVar_Summ_ByGrp_2_pct	%	AnlsGrouping_01_Trt	Treatment	AnlsGrouping_01_Trt_1	Placebo	AnlsGrouping_02_Sex	Sex	AnlsGrouping_02_Sex_2	Female	61.6279069767442	( 61.6)
Mth01_CatVar_Summ_ByGrp_2_pct	%	AnlsGrouping_01_Trt	Treatment	AnlsGrouping_01_Trt_2	Xanomeline Low Dose	AnlsGrouping_02_Sex	Sex	AnlsGrouping_02_Sex_1	Male	40.4761904761905	( 40.5)
Mth01_CatVar_Summ_ByGrp_2_pct	%	AnlsGrouping_01_Trt	Treatment	AnlsGrouping_01_Trt_2	Xanomeline Low Dose	AnlsGrouping_02_Sex	Sex	AnlsGrouping_02_Sex_2	Female	59.5238095238095	( 59.5)
Mth01_CatVar_Summ_ByGrp_2_pct	%	AnlsGrouping_01_Trt	Treatment	AnlsGrouping_01_Trt_3	Xanomeline High Dose	AnlsGrouping_02_Sex	Sex	AnlsGrouping_02_Sex_1	Male	52.3809523809524	( 52.4)
0.5934357753	0.5934	Mth01_CatVar_Summ_ByGrp_2_pct	%	AnlsGrouping_01_Trt	Treatment	AnlsGrouping_01_Trt_3	Xanomeline High Dose	AnlsGrouping_02_Sex	Sex	AnlsGrouping_02_Sex_2	Female	47.6190476190476	( 47.6)

Page tree

Versions Compared

Old Version 1

New Version Current

Key