Note the below modeling approach can be used in all body-system domains when abnormalities are identified through examination of an image produced by an imaging procedure.

Row 1:Shows one or more lesions have been identified in the lower limb region at Visit 1.
Row 2:Shows lesion 1 is found in the left popliteal artery, below the knee.
Row 3:Shows lesion 2 is found in the right femoral artery.
Row 4:Shows one or more lesions have been identified in the lower limb region at Visit 4
Row 5:Shows after treatment, lesion 1 is not detected, hence RESLOC is not populated, suggesting the treatment had worked.
Row 6:Shows lesion 2 is still present at the right femoral artery.
Row 7:Shows there are no more lesions identified in the lower limb region at Visit 8.
Row 8:Shows after treatments, lesion 1 is not detected, hence RESLOC is not populated, suggesting the treatment had worked.
Row 9:Shows after treatments, lesion 2 is not detected, hence RESLOC is not populated, suggesting the treatment had worked.

any body system domain.xpt

body-system domain.xpt

Row

STUDYID

DOMAIN

USUBJID

--SEQ

--LNKID

--TEST

--LOC

--ORRES

--STRESC--Result LOC--Result LAT--Result LOCDTL

METHOD

EVEL

VISITNUM

VISIT

DTC

1
any body system domain409121
Abnormality IndicatorLOWER LIMB REGIONYY


CT PERIPHERAL ANGIOGRAPHYINVESTIGATOR2VISIT 12007-02-07
2
any body system domain409122Lesion 1Examination for AbnormalityLOWER LIMB REGION

lesion

(or aneurysm, etc)

lesionPOPLITEAL ARTERYLEFTBELOW THE KNEECT PERIPHERAL ANGIOGRAPHYINVESTIGATOR2VISIT 12007-02-07
3
any body system domain409123Lesion 2Examination for AbnormalityLOWER LIMB REGIONlesionlesionFEMORAL ARTERYRIGHT
CT PERIPHERAL ANGIOGRAPHYINVESTIGATOR2VISIT 12007-02-07
4
any body system domain409124
Abnormality IndicatorLOWER LIMB REGIONYY


CT PERIPHERAL ANGIOGRAPHYINVESTIGATOR5VISIT 42007-04-07
5
any body system domain409125Lesion 1Examination for AbnormalityLOWER LIMB REGIONlesion not detectedlesion not detected


CT PERIPHERAL ANGIOGRAPHYINVESTIGATOR5VISIT 42007-04-07
6
any body system domain409126Lesion 2Examination for AbnormalityLOWER LIMB REGIONlesionlesionFEMORAL ARTERYRIGHT
CT PERIPHERAL ANGIOGRAPHYINVESTIGATOR5VISIT 42007-04-07
7
any body system domain409127
Abnormality IndicatorLOWER LIMB REGIONNN


CT PERIPHERAL ANGIOGRAPHYINVESTIGATOR9VISIT 82007-10-08
8
any body system domain409128Lesion 1Examination for AbnormalityLOWER LIMB REGIONlesion not detectedlesion not detected


CT PERIPHERAL ANGIOGRAPHYINVESTIGATOR9VISIT 82007-10-08
9
any body system domain409129Lesion 2Examination for AbnormalityLOWER LIMB REGIONlesion not detectedlesion not detected


CT PERIPHERAL ANGIOGRAPHYINVESTIGATOR9VISIT 82007-10-08

Dataset Debug Messages

Dataset Wrapper Debug Message

Please add a row column to your dataset.

Pros:
  1. Reusibility of the result location variables in other domains when needed.
  2. Simplicity: there is only one location for (Test)LOC for the Lesion/abnormality Location Identification process. Imaging location is treated as the general location for --LOC, and all result locations are under the RESLOC variable.
  3. The ability to represent different "types" of abnormalities in ORRES, i.e. aneurysm, calcified annulus or calcified valvular leaflets, stenosis, or an actual cardiovascular lesion (plaque causing stenosis), etc. This approach enables us to avoid creating "abnormality-type" specific --TESTs, such as aneurysm indicator, calcification indicator, etc.
  4. The ability to create a negative record when the abnormality is no longer observed.
  5. This approach aligns the most with what happens in reality (the assessment of an image to find abnormalities).
Cons:
  1. We currently have DIR, LAT, PORTOT, Loc Detail, how many more LOC-related variables might we need if there are more complicated locations info that we need to represent. For example, the graft use-case where we need to indicate a location being a graft, or transplant, we created a NSV for that.

Additional concerns to address:

  • Controlled terminology: finalize the details for the test = Examination for Abnormality.
  • Team needs to think about the implication of this approach. The cardiovascular common data element projects (both CV-imaging and Endpoints TAs) contained many "indicator" values such as the following: aneurysm indicator, Cusp Prolapse Indicator, Cardiac Muscle Hypertrophy Indicator, Aortic Coarctation Indicator, Mitral valve stenosis Indicator, Mitral valve regurgitation indicator, pleural effusion indicator, etc, where the responses are "Y/N". At the time (well, still) CDISC treated this type of data as "pre-specified findings" and the modeling approach was to create "XXX Indicator" type of questions. However, the question has always been: are there really "pre-specified findings" from observing an image? Did you plan to find an aneurysm from the chest CT scan? Did you plan to find pleural effusion in the pleural cavity? What was planned was an imaging procedure, such as a chest CT scan, and during this diagnostic procedure, abnormalities were identified. The observed abnormalities are results from examining the image, is it correct to treat these "results" as TESTs by creating pre-specified finding indicator questions, i.e. aneurysm indicator?
    • If what we proposed below is the way forward, CDISC will move away from creating "Indicator" type of questions for findings resulted from examination of an image.

For example, for the existing test: Blood Regurgitation Indicator, results are Y/N. Using the new modeling approach, it would look like the following:

Row

STUDYID

DOMAIN

USUBJID

SEQ

LNKID

TEST

LOC

ORRES

STRESCResult LOC

METHOD

EVEL

VISITNUM

VISIT

TUDTC

1


any body system domain409121
Abnormality IndicatorLOWER LIMB REGIONYY
ECHOINVESTIGATOR1VISIT 12007-02-07
2


any body system domain409122
Examination for AbnormalityLOWER LIMB REGION

blood regurgitation

blood regurgitationMitral ValveECHOINVESTIGATOR1VISIT 12007-02-07
3


any body system domain409121
Abnormality IndicatorLOWER LIMB REGIONNN
ECHOINVESTIGATOR2VISIT 22007-02-16
4


any body system domain409122
Examination for AbnormalityLOWER LIMB REGION

blood regurgitation not detected

blood regurgitation not detectedMitral ValveECHOINVESTIGATOR2VISIT 22007-02-16









  • No labels