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This example is currently in draft.

This example shows findings from an assessment of the unique pattern of allelic variation in genes of human leukocyte antigens (HLA), for purposes such as selecting cell, tissue and organ donors, diagnosing autoimmune diseases, determining the risk of adverse drug reactions, or to guide immunotherapies. An arbitrary identifier for the allele is represented in GFCOPYID. Patterns of HLA allele sequences are reported as short codes from a publicly available reference database.  

Rows 1-9, 11, 15-16:Show the characterization of the unique pattern of sequence variation for the allele of the HLA gene of interest represented in GFSYM.
Rows 10, 12-14:Show attempted assessments for which results could not be generated due to sequence overlap with the detected DRB1 allele.

gf.xpt

gf.xpt

Row STUDYIDDOMAINUSUBJIDGFSEQGFREFIDGFTESTCDGFTESTGFTSTDTLGFORRESGFSYMGFSYMTYPGFCOPYIDGFSTATGFREASNDGFNAMGFSPECGFMETHODVISITNUMVISITVISITDYGFDTCGFDY
1Study-123GFS123-0011HGA4567VARPROFVariant ProfileALLELE TYPEA*02:TSXZHLA-AGENE WITH PROTEIN PRODUCT1

ACME GenomicsDNASANGER SEQUENCING-1SCREENING-19/16/2023-2
2Study-123GFS123-0011HGA4567VARPROFVariant ProfileALLELE TYPEA*03:ABSAXHLA-AGENE WITH PROTEIN PRODUCT2

ACME GenomicsDNASANGER SEQUENCING




3Study-123GFS123-0011HGA4567VARPROFVariant ProfileALLELE TYPEB*18:TXYFHLA-BGENE WITH PROTEIN PRODUCT1

ACME GenomicsDNASANGER SEQUENCING




4Study-123GFS123-0011HGA4567VARPROFVariant ProfileALLELE TYPEB*38:01HLA-BGENE WITH PROTEIN PRODUCT2

ACME GenomicsDNASANGER SEQUENCING




5Study-123GFS123-0011HGA4567VARPROFVariant ProfileALLELE TYPEC*07:AAEPNHLA-CGENE WITH PROTEIN PRODUCT1

ACME GenomicsDNASANGER SEQUENCING




6Study-123GFS123-0011HGA4567VARPROFVariant ProfileALLELE TYPEC*12:AAGWEHLA-CGENE WITH PROTEIN PRODUCT2

ACME GenomicsDNASANGER SEQUENCING




6Study-123GFS123-0011HGA4567VARPROFVariant ProfileALLELE TYPEDRB1*07:ACEUAHLA-DRB1GENE WITH PROTEIN PRODUCT1

ACME GenomicsDNASANGER SEQUENCING




7Study-123GFS123-0011HGA4567VARPROFVariant ProfileALLELE TYPEDRB1*14:ABZZVHLA-DRB1GENE WITH PROTEIN PRODUCT2

ACME GenomicsDNASANGER SEQUENCING




9Study-123GFS123-0011HGA4567VARPROFVariant ProfileALLELE TYPEDRB3*01:XXHLA-DRB3GENE WITH PROTEIN PRODUCT1

ACME GenomicsDNASANGER SEQUENCING




10Study-123GFS123-0011HGA4567VARPROFVariant ProfileALLELE TYPE
HLA-DRB3GENE WITH PROTEIN PRODUCT2NOT DONEDRB3*ACME GenomicsDNASANGER SEQUENCING




11Study-123GFS123-0011HGA4567VARPROFVariant ProfileALLELE TYPEDRB4*01:FVUUHLA-DRB4GENE WITH PROTEIN PRODUCT1

ACME GenomicsDNASANGER SEQUENCING




12Study-123GFS123-0011HGA4567VARPROFVariant ProfileALLELE TYPE
HLA-DRB4GENE WITH PROTEIN PRODUCT2NOT DONEDRB4*ACME GenomicsDNASANGER SEQUENCING




13Study-123GFS123-0011HGA4567VARPROFVariant ProfileALLELE TYPE
HLA-DRB5GENE WITH PROTEIN PRODUCT1NOT DONEDRB5*ACME GenomicsDNASANGER SEQUENCING




14Study-123GFS123-0011HGA4567VARPROFVariant ProfileALLELE TYPE
HLA-DRB5GENE WITH PROTEIN PRODUCT2NOT DONEDRB5*ACME GenomicsDNASANGER SEQUENCING




15Study-123GFS123-0011HGA4567VARPROFVariant ProfileALLELE TYPEDQB1*02:ACBXNHLA-DQB1GENE WITH PROTEIN PRODUCT1

ACME GenomicsDNASANGER SEQUENCING




16Study-123GFS123-0011HGA4567VARPROFVariant ProfileALLELE TYPEDQB1*05:ACEDBHLA-DQB1GENE WITH PROTEIN PRODUCT2

ACME GenomicsDNASANGER SEQUENCING




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