This section illustrates example analysis datasets for the following endpoints:

Source Data

The SDTM examples used as the source data are from Section 2.1, Basic Systolic Function. The ADSL draws from the DM dataset. The CV dataset shows two visits for subject DMD-EF-01-101. The records for which CVTESTCD = "LVEF_C" and "RVEF_C" were selected for analysis. The records in the LB dataset where LBTESTCD = "BNPPRONT" were used to compute the percent change over time and as a potential covariate.

Example Analysis Datasets

The tables below show the analysis dataset metadata and parameters used for this example.

Dataset Name

Dataset Description

Class of Dataset

Structure

Keys

Documentation

Location

ADSL

Subject-Level Analysis Dataset

SUBJECT LEVEL ANALYSIS DATASET

One record per subject

USUBJIDADaMIGadsl.xpt
ADCVNTPCardiac Ejection Fraction and NTproBNP Analysis Dataset

BASIC DATA STRUCTURE

One record per subject per analysis visit per parameterUSUBJID, AVISITN, PARAMN

Analysis Dataset

adcvntp.xpt
ADCVCMRCardiovascular CMR Ejection Fraction Analysis Dataset

BASIC DATA STRUCTURE

One record per subject per analysis visit per parameterUSUBJID, AVISITN, PARAMN

Analysis Dataset

adcvcmr.xpt

ADSL

The ADSL contains subject characteristics and covariates that are important for analyses. Stratification variables can be created in the ADSL to subset the data. More than one SDTM dataset may be used as input to the ADSL. This is a simplified example ADSL dataset; the ADaMIG should be referenced for additional variables.

For this example:

Variable NameVariable LabelTypeCodelist/Controlled Terms/FormatSourceDerivation/Comment
STUDYIDStudy IdentifierChar

DM.STUDYID


USUBJIDUnique Subject IdentifierChar

DM.USUBJID


BRTHDTDate of BirthNumdate9.


Date portion of DM.BRTHDTC converted to numeric and displayed in a format such as date9.from ISO 8601 format to numeric date.9 
AAGEAnalysis AgeNum


Age as screening, computed by DM.RFICDTC - BRTHDTC as continuous variable. Note that some countries do not allow capturing date of birth, so this could be computed by capturing age in years and months on a CRF.
AGEAgeNum

DM.AGE


AGEUAge UnitsCharYEARS

DM.AGEU


SEX

SexChar(SEX)

DM.SEX


RACE

RaceNum(RACE)

DM.RACE


TRTSDTDate of First Exposure to TreatmentNumdate9.
Date portion of DM.RFSTDTC converted to numeric and displayed in a format such as date9.
RFICDT

Date of Informed Consent

Numdate9.
Date portion of DM.RFICDTC converted to numeric and displayed in a format such as date9.
DTHDT

Date of Death

Numdate9.
Date portion of DM.RFSTDTC converted to numeric and displayed in a format such as date9.
DTHFL

Subject Death
Flag

CharYDM.DTHFL
TRT01P

Planned Treatment for Period 01

CharDrug A, Drug B

Predecessor: DM.ARM.

May be changed to lower case or more descriptive term for use in tables and listings.

TRT01A

Actual Treatment for Period 01

CharDrug A, Drug B

Predecessor: DM.ACTARM.

Note: Actual treatment matches planned treatment unless there is a reason subject does not take planned drug.

ITTFL

Intent-To-Treat Population Flag

Char

Y; N


Derive the intent-to-treat population as per the protocol and SAP.

ACEINHFL

ACE Inhibitor Medications Flag

Char

Y; N


Select a list of ACE inhibitor medications from concomitant medications (CM) domain as per Statistical Analysis Plan or Protocol. Set to "Y" if these medications were taken during the study, and "N" if they are absent. Can be used to subset or to exclude the population who took ACE inhibitors.

HEIGHTSC

Height (cm) at Screening

Num



Set to VS.VSSTRESN where VS.VSTESTCD = "HEIGHT" and VISITNUM= 1 (or screening visit for your study).

WEIGHTSC

Weight (kg) at Screening

Num



Set to VS.VSSTRESN where VS.VSTESTCD = "WEIGHT" and VISITNUM = 1 (or screening visit for your study).

BSASC

Body Surface Area at Screening

Num



Select where VISITNUM = 1 (or screening visit for your study). Compute from HEIGHT and WEIGHT, using the Du Bois method. BSA = 0.007184 × W0.425 × H0.725

There are multiple methods and the study protocol should describe which one to use (e.g., Du Bois, Mosteller, Haycock, Gehan & George, Boyd, Fujimoto, Takahira, and Schlich).

RowSTUDYIDUSUBJIDBRTHDTAAGEAGEAGEUSEXRACETRTSDTRFICDTDTHDTDTHFLTRT01PITTFLACEINHFLHEIGHTSCWEIGHTSCBSASC
1DMD-EFLGEDMD-EF-01-10107FEB201012.312YEARSMBLACK OR AFRICAN AMERICAN16JUN202216JUN2022

Drug AYY119200.82
2DMD-EFLGEDMD-EF-01-10101MAY200814.114YEARSMASIAN13JUN202213JUN2022

Drug AYY115300,95
3DMD-EFLGEDMD-EF-01-10110JUL200319.019YEARSMNATIVE HAWAIIAN OR OTHER PACIFIC ISLANDER15JUL2202215JUL2022

Drug BYN140451,30
4DMD-EFLGEDMD-EF-01-10115JAN199923.723YEARSMWHITE06SEP202206SEP202223NOV2023YDrug BYY132421,21

ADCVNTP

The ADCVNTP includes tests pertinent to analyses. The records from CV where CVTESTCD = "LVEF_C" and "RVEF_C" and the records from LB where LBTESTCD = "BNPPRONT" were selected. Many lab draws may occur throughout the year, but only those linked to a specific visit were included. By subsetting the LB dataset by LBLNKID not missing, laboratory data that aligns with CV data can be filtered out and sorted using USUBJID and VISIT. If LBLNKID is not available, a windowing strategy could be used to select the laboratory draw closest to that visit for merging with CV, computed in AVISIT.

In this example, variables BASE, CHG, PCHG and CHGCAT1 were used to facilitate analyses of the efficacy endpoints.

DatasetVariableWhereTypeOriginDerivation/Comment
ADCVNTPAVALPARAMCD in ("LVEF_C", "RVEF_C")NumPredecessorSet to CV.CVSTRESN 
ADCVNTPAVALPARAMCD = "BNPPRONT"NumPredecessorSet to LB.LBSTRESN where LB.LBTESTCD = "BNPPRONT"
ADCVNTPCHGCAT1PARAMCD in ("LVEF_C", "RVEF_C")Char

Categorize the value of CHGCAT1 as follows: If CHG >= 5.00 THEN CHGCAT1 = "Decline >=5%".

Else if CHG not missing and CHG < 5.00 THEN CHGCAT1 = "Decline <5%"

ADCVNTPCHGCAT1PARAMCD = "BNPPRONT"Char

Categorize the value of CHCAT1 as follows: "Increase >100 pg/mL"; "Increase <=100 pg/mL"; "No increase"

Variable NameVariable LabelTypeCodelist/Controlled Terms/FormatSourceDerivation/Comment
STUDYIDStudy IdentifierChar

CV.STUDYID


USUBJIDUnique Subject IdentifierChar

CV.USUBJID


BRTHDTDate of BirthNumDate9.

ADSL.BRTHDT


AAGEAnalysis AgeNum

ADSL.AAGE


AGEUAge UnitCharYEARS

ADSL.AGEU


SEX

SexChar(SEX)

DM.SEX


RACE

RaceNum(RACE)

DM.RACE


TRTSDT

Date of First Exposure to Treatment

Numdate9ADSL.TRTSDT
TRT01P

Planned Treatment for Period 01

CharDrug A; Drug BADSL.TRT01P
TRT01A

Actual Treatment for Period 01

CharDrug A; Drug BADSL.TRT01A

ITTFL

Intent-To-Treat Population Flag

Char

Y; N

ADSL.ITTFL


HEIGHT

Height (cm)

Num



Set to VS.VSSTRESN where VS.VSTEST = "HEIGHT" by visit.

WEIGHT

Weight (kg)

Num



Set to VS.VSSTRESN where VS.VSTEST = "WEIGHT" by visit.

BSABody Surface Area (m2)Num



Compute from HEIGHT and WEIGHT at each visit, using the Du Bois method. BSA = 0.007184 × W0.425 × H0.725

There are multiple methods and the study protocol should describe which one to use (e.g., Mosteller, Haycock, Gehan & George, Boyd, Fujimoto, Takahira, and Schlich).

ACEINHFL

ACE Inhibitor Medications Flag

Char

Y; N

ADSL.ACEINHFL


PARAMParameterChar

Left Ventricular Ejection Fraction, Calculated (%);

Right Ventricular Ejection Fraction, Calculated (%);

N-Terminal ProB-type Natriuretic Peptide (pg/mL)

CV.CVTEST

LB.LBTEST


PARAMCDParameter CodeChar

LVEF_C;

RVEF_C;

BNPPRONT

CV.CVTESTCD

LB.LBTESTCD


PARAMNParameter (N)Num



Number PARAMCD as follows:

LVEF_C = "1"

RVEF_C = "2"

BNPPRONT = "3"

AVALAnalysis ValueNum


See Parameter Value Metadata

AVISITAnalysis VisitChar

Visit 1 (Baseline); 

Visit 6 (1 Year)


If CV.VISIT = "VISIT 1" then AVISIT = "Visit 1 (Baseline)".

If CV.VISIT = "VISIT 6" then AVISIT = "Visit 6 (1 Year)".

AVISITNAnalysis Visit (N)Num1; 6

CV.VISITNUM

LB.VISITNUM


VISITVisitNum

VISIT 1; VISIT 6

CV.VISIT

LB.VISIT


ADTAnalysis DateNumdate9.
Date portion of CV.CVDTC or LB.LBDTC converted to numeric and displayed in a format such as date9. 
ABLFLBaseline Record FlagCharY

If CV.VISIT = "VISIT 1" then ABLFL = "Y".

BASEBaseline ValueNum

Set BASE to AVAL from the record for that subject and parameter where ABLFL = "Y".

Populate BASE for additional visits by merging the value of BASE in the baseline record by USUBJID and PARAMCD.

CHGChange from BaselineNum

Compute CHG = AVAL - BASE for that record. Only compute for post-baseline records.
PCHGPercent Change from BaselineNum

Compute PCHG = (CHG / BASE) * 100. Only compute for post-baseline records.
CHGCAT1Change from Baseline Category 1Char

Decline >=5%; Decline <5%; Increase GT 100 pg/mL


See Parameter Value Metadata
SRCDOMSource DataChar

CV; LB


Set to the SDTM domain name that relates to the analysis value.
SRCVARSource VariableChar



Set to the SDTM variable that relates to the analysis value.
SRCSEQSource Sequence NumberNum


CV.CVSEQ

LB.LBSEQ

Set to the SDTM domain sequence number that relates to the analysis value.

This example dataset shows the findings and additional analysis variables associated with:

Rows 1-2:Show the baseline ejection fraction measurements at VISIT 1.
Row 3:Shows the baseline N-Terminal ProB-type Natriuretic Peptide test results at VISIT 1.
Rows 4-5:Show the baseline ejection fraction measurements at VISIT 6.
Row 6:Shows the baseline N-Terminal ProB-type Natriuretic Peptide test results at VISIT 6.
RowSTUDYIDUSUBJIDAAGEAGEUSEXRACETRT01PTRT01AITTFLHEIGHTWEIGHTBSAACEINHFLPARAMPARAMCDPARAMNAVALAVISITAVISITNVISITADTABLFLBASECHGPCHGCHGCAT1SRCDOMSRCVARSRCSEQ
1DMD-EFLGEDMD-EF-01-10112.3YEARSMBLACK OR AFRICAN AMERICANDrug ADrug AY119200.82YLeft Ventricular Ejection Fraction, Calculated (%)LVEF_C167Visit 1 (Baseline)1VISIT 116MAY2022Y67


CVCVTESTCD3
2DMD-EFLGEDMD-EF-01-10112.3YEARSMBLACK OR AFRICAN AMERICANDrug ADrug AY119200.82YRight Ventricular Ejection Fraction, Calculated (%)RVEF_C274Visit 1 (Baseline))1VISIT 116MAY2022Y74


CVCVTESTCD7
3DMD-EFLGEDMD-EF-01-10112.3YEARSMBLACK OR AFRICAN AMERICANDrug ADrug AY119200.82YN-Terminal ProB-type Natriuretic Peptide (IU/L)BNPPRONT340Visit 1 (Baseline)1VISIT 116MAY2022Y40


LBLBTESTCD1
4DMD-EFLGEDMD-EF-01-10112.3YEARSMBLACK OR AFRICAN AMERICANDrug ADrug AY132321.08YLeft Ventricular Ejection Fraction, Calculated (%)LVEF_C160Visit 6 (1 Year)6VISIT 606APR2023
67-7-10.447761Decline >=5.0%CVCVTESTCD11
5DMD-EFLGEDMD-EF-01-10112.3YEARSMBLACK OR AFRICAN AMERICANDrug ADrug AY132321.08YRight Ventricular Ejection Fraction, Calculated (%)RVEF_C261Visit 6 (1 Year)6VISIT 606APR2023
74-13-17.567568Decline >=5.0%CVCVTESTCD15
6DMD-EFLGEDMD-EF-01-10112.3YEARSMBLACK OR AFRICAN AMERICANDrug ADrug AY132321.08YN-Terminal ProB-type Natriuretic Peptide (IU/L)BNPPRONT3900Visit 6 (1 Year)6VISIT 106APR2023
408602,150Increase GT 100 pg/mLLBLBTESTCD2

ADCVCMR

The ADCVMR is an efficacy analysis dataset with only a few records for more complex modeling of changes in ejection fraction, plus the ProB-type test results. It is an ADaM Basic Data Structure (BDS) dataset, with additional variables added from ADCVNTP.

The dataset can provide multivariate analyses by taking the lab tests of interest (PARAMCD = "BNPPRONT") or other analysis datasets, and merging variables of interest with the ADCVNTP dataset. This summary dataset is created from other ADaM datasets and only variables used in the analysis are kept.

Variable NameVariable LabelTypeCodelist/Controlled Terms/FormatSourceDerivation/Comment
STUDYIDStudy IdentifierChar

ADCVNTP.STUDYID


USUBJIDUnique Subject IdentifierChar

ADCVNTP.USUBJID


BRTHDTDate of BirthNumdate9.

ADCVNTP.BRTHDT


AAGEAnalysis AgeNum

ADCVNTP.AAGE


AGEUAge UnitCharYEARS

ADCVNTPL.AGEU


SEX

SexChar(SEX)

ADCVNTPL.SEX


RACE

RaceNum(RACE)

ADCVNTPL.RACE


TRTSDT

Date of First Exposure to Treatment

Numdate9.ADCVNTP.TRTSDT
TRT01P

Planned Treatment for Period 01

CharDrug A; Drug BADCVNTP.TRT01P

ITTFL

Intent-To-Treat Population Flag

Char

Y; N

ADCVNTP.ITTFL


BSABody Surface Area (m2)Num


ADCVNTP.BSA


ACEINHFL

ACE Inhibitor Medications Flag

Char

Y; N

ADCVNTP.ACEINHFL


BNPPRONT


Num



BNPPRONT = AVAL where PARAMCD =  ADCVNTP.BNPPRONT, and merge by USUBJID and AVISITN.

Note: there are many ways to add this including transposing the data.

PARAMParameterChar

Left Ventricular Ejection Fraction, Calculated (%);

Right Ventricular Ejection Fraction, Calculated (%)

ADCVNTP.PARAM


PARAMCDParameter CodeChar

LVEF_C;

RVEF_C

ADCVNTP.PARAMCD


PARAMNParameter (N)Num


ADCVNTP.PARAMN


AVALAnalysis ValueNum

ADCVNTP.AVAL


AVISITAnalysis VisitChar

Visit 1 (Baseline);

Visit 6 (1 Year)

ADCVNTP.AVISIT


AVISITNAnalysis Visit (N)Num1; 6

ADCVNTP.AVISITN


ADTAnalysis DateNumdate9.ADCVNTP.ADT
ABLFLBaseline Record FlagCharYADCVNTP.ABLFL


BASEBaseline ValueNum
ADCVNTP.BASE


CHGChange from BaselineNum
ADCVNTP.CHG
PCHGPercent Change from BaselineNum
ADCVNTP.PCHG
CHGCAT1Change from Baseline Category 1Char

Decline >=5%;

Decline <5%;

Increase GT 100 pg/mL

ADCVNTP.CHGCAT1


RowSTUDYIDUSUBJIDBRTHDTTRT01PAAGEAGUSEXRACETRT01AITTFLBSAACEINHFLBNPPRONTPARAMPARAMCDPARAMNAVALAVISITAVISITNADTABLFLBASECHGPCHGCHGCAT1
1DMD-EFLGEDMD-EF-01-10107FEB2010Drug A12.3YEARSMBLACK OR AFRICAN AMERICANDrug AY0.82Y40Left Ventricular Ejection Fraction, Calculated (%)LVEF_C170Visit 1 (Baseline)116MAY2022Y70


2DMD-EFLGEDMD-EF-01-10107FEB2010Drug A12.3YEARSMBLACK OR AFRICAN AMERICANDrug AY0.82Y40Right Ventricular Ejection Fraction, Calculated (%)RVEF_C275Visit 1 (Baseline)116MAY2022Y75


3DMD-EFLGEDMD-EF-01-10107FEB2010Drug A12.3YEARSMBLACK OR AFRICAN AMERICANDrug AY1.08Y900Left Ventricular Ejection Fraction, Calculated (%)LVEF_C165Visit 6 (1 Year)606APR2023
70-5-10.447761Decline >=5.0%
4DMD-EFLGEDMD-EF-01-10107FEB2010Drug A12.3YEARSMBLACK OR AFRICAN AMERICANDrug AY1.08Y900Right Ventricular Ejection Fraction, Calculated (%)RVEF_C270Visit 6 (1 Year)606APR2023
75-5-17.567568Decline >=5.0%