"HLA-Typing"

This example is currently in draft.

This example shows findings from an assessment <> with the purpose of determining <>.

Human leukocyte antigen (HLA) typing

This example shows findings from an assessment of genomic variations in drug metabolizing genes with the purpose of determining how variations in those genes affect drug absorption, distribution, metabolism, and excretion (ADME). The method used to summarize nucleotide variation is represented in variable GFANMETH where appropriate. Identifying information for the genomic panel is represented in SPDEVID. Additional information about the genomic panel may be represented in the Medical Device Domains (e.g., DI domain) as needed.

This example shows findings from an assessment of genomic variations in genes associated with HLA typing with the purpose of determining the allele subtypes.

Rows 1-6, 9-14:

Row Captions Debug Messages

Please provide a caption for every row caption label.
Please provide a label for every row caption.

$titleHtml

gf.xpt

Study Identifier	Domain Abbreviation	Unique Subject Identifier	Sponsor Device Identifier	Non-Host Organism Identifier	Sequence Number	Group ID	Reference ID	Sponsor-Defined Identifier	Link ID	Link Group ID	Short Name of Genomic Measurement	Name of Genomic Measurement	Measurement, Test, or Examination Detail	Result or Finding in Original Units	Genomic Symbol	Genomic Symbol Type	Copy Identifier	Completion Status	Reason Test Not Done	External File Path	Laboratory/Vendor Name	Specimen Material Type	Method of Test or Examination	Run ID	Analysis Method	Baseline Flag	Derived Flag	Lower Limit of Quantitation	Repetition Number	Visit Number	Visit Name	Planned Study Day of Visit	Date/Time of Specimen Collection	Study Day of Specimen Collection	Planned Time Point Name	Planned Time Point Number	Planned Elapsed Time from Time Point Ref	Time Point Reference	Date/Time of Reference Time Point
STUDYID	DOMAIN	USUBJID	SPDEVID	NHOID	GFSEQ	GFGRPID	GFREFID	GFSPID	GFLNKID	GFLNKGRP	GFTESTCD	GFTEST	GFTSTDTL	GFORRES	GFSYM	GFSYMTYP	GFCOPYID	GFSTAT	GFREASND	GFXFN	GFNAM	GFSPEC	GFMETHOD	GFRUNID	GFANMETH	GFBLFL	GFDRVFL	GFLLOQ	GFREPNUM	VISITNUM	VISIT	VISITDY	GFDTC	GFDY	GFTPT	GFTPTNUM	GFELTM	GFTPTREF	GFRFTDTC
Study-123	GF	S123-001			1		HGA4567			An assessment of the unique pattern of sequence variation of one to many loci associated with a normal or abnormal biological process.	VARPROF	Variant Profile	ALLELE TYPE	A*02:TSXZ	HLA-A	GENE WITH PROTEIN PRODUCT	1				ACME Genomics	DNA	SANGER SEQUENCING							-1	SCREENING	-1	9/16/2023	-2
Study-123	GF	S123-001			1		HGA4567				VARPROF	Variant Profile	ALLELE TYPE	A*03:ABSAX	HLA-A	GENE WITH PROTEIN PRODUCT	2				ACME Genomics	DNA	SANGER SEQUENCING
Study-123	GF	S123-001			1		HGA4567				VARPROF	Variant Profile	ALLELE TYPE	B*18:TXYF	HLA-B	GENE WITH PROTEIN PRODUCT	1				ACME Genomics	DNA	SANGER SEQUENCING
Study-123	GF	S123-001			1		HGA4567				VARPROF	Variant Profile	ALLELE TYPE	B*38:01	HLA-B	GENE WITH PROTEIN PRODUCT	2				ACME Genomics	DNA	SANGER SEQUENCING
Study-123	GF	S123-001			1		HGA4567				VARPROF	Variant Profile	ALLELE TYPE	C*07:AAEPN	HLA-C	GENE WITH PROTEIN PRODUCT	1				ACME Genomics	DNA	SANGER SEQUENCING
Study-123	GF	S123-001			1		HGA4567				VARPROF	Variant Profile	ALLELE TYPE	C*12:AAGWE	HLA-C	GENE WITH PROTEIN PRODUCT	2				ACME Genomics	DNA	SANGER SEQUENCING
Study-123	GF	S123-001			1		HGA4567				VARPROF	Variant Profile	ALLELE TYPE	DRB1*07:ACEUA	HLA-DRB1	GENE WITH PROTEIN PRODUCT	1				ACME Genomics	DNA	SANGER SEQUENCING
Study-123	GF	S123-001			1		HGA4567				VARPROF	Variant Profile	ALLELE TYPE	DRB1*14:ABZZV	HLA-DRB1	GENE WITH PROTEIN PRODUCT	2				ACME Genomics	DNA	SANGER SEQUENCING
Study-123	GF	S123-001			1		HGA4567				VARPROF	Variant Profile	ALLELE TYPE	DRB3*01:XX	HLA-DRB3	GENE WITH PROTEIN PRODUCT	1				ACME Genomics	DNA	SANGER SEQUENCING
Study-123	GF	S123-001			1		HGA4567				VARPROF	Variant Profile	ALLELE TYPE	DRB3*	HLA-DRB3	GENE WITH PROTEIN PRODUCT	2	NOT DONE	DRB3*		ACME Genomics	DNA	SANGER SEQUENCING
Study-123	GF	S123-001			1		HGA4567				VARPROF	Variant Profile	ALLELE TYPE	DRB4*01:FVUU	HLA-DRB4	GENE WITH PROTEIN PRODUCT	1				ACME Genomics	DNA	SANGER SEQUENCING
Study-123	GF	S123-001			1		HGA4567				VARPROF	Variant Profile	ALLELE TYPE		HLA-DRB4	GENE WITH PROTEIN PRODUCT	2	NOT DONE	DRB4*		ACME Genomics	DNA	SANGER SEQUENCING
Study-123	GF	S123-001			1		HGA4567				VARPROF	Variant Profile	ALLELE TYPE		HLA-DRB5	GENE WITH PROTEIN PRODUCT	1	NOT DONE	DRB5*		ACME Genomics	DNA	SANGER SEQUENCING
Study-123	GF	S123-001			1		HGA4567				VARPROF	Variant Profile	ALLELE TYPE		HLA-DRB5	GENE WITH PROTEIN PRODUCT	2	NOT DONE	DRB5*		ACME Genomics	DNA	SANGER SEQUENCING
Study-123	GF	S123-001			1		HGA4567				VARPROF	Variant Profile	ALLELE TYPE	DQB1*02:ACBXN	HLA-DQB1	GENE WITH PROTEIN PRODUCT	1				ACME Genomics	DNA	SANGER SEQUENCING
Study-123	GF	S123-001			1		HGA4567				VARPROF	Variant Profile	ALLELE TYPE	DQB1*05:ACEDB	HLA-DQB1	GENE WITH PROTEIN PRODUCT	2				ACME Genomics	DNA	SANGER SEQUENCING

$warningHtml

Dataset Wrapper Debug Message

Please add a row column to your dataset.

Page tree

"HLA-Typing"