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This example is currently in draft.

This example shows findings from an assessment of the HTT gene sequence with the purpose of determining the number of CAG repeats in subjects with Huntington's Disease.

Glenn Barnes -

Row 1:Shows the predicted number of CAG repeats for one allele of the HTT gene in the subject. The arbitrary allele identifier is shown in GFCOPYID.
Row 2:Shows the ... . The ... is shown in variable GFCOPYID.
Row 3:Shows the ... . The ... is shown in variable GFCOPYID.
Row 4:Shows the ... . The ... is shown in variable GFCOPYID.
Row 5:Shows the ... . The ... is shown in variable GFCOPYID.
Row 6:Shows the ... . The ... is shown in variable GFCOPYID.

gf.xpt

gf.xpt

RowSTUDYIDDOMAINUSUBJIDGFSEQGFREFIDGFTESTCDGFTESTGFTSTDTLGFORRESGFSTRESCGFSTRESNGFSYMGFSYMTYPGFGENLOCGFSEQIDGFCOPYIDGFSPECGFMETHODVISITNUMGFDTC
1ABC123GFHD01-1011789879VNTRVariable Number Tandem RepeatsPREDICTED NUMBER OF CAG REPEATS434343HTTGENE WITH PROTEIN PRODUCTc.52_54LRG_763t11gDNACAPILLARY ELECTROPHORESIS12017-05-22
2ABC123GFHD01-1012789879VNTRVariable Number Tandem RepeatsPREDICTED NUMBER OF CAG REPEATS252525HTTGENE WITH PROTEIN PRODUCTc.52_54LRG_763t12gDNACAPILLARY ELECTROPHORESIS12017-05-22
3ABC123GFHD01-1013679898VNTRVariable Number Tandem RepeatsNUMBER OF CAG REPEATS444444HTTGENE WITH PROTEIN PRODUCTc.52_54LRG_763t11gDNASEQUENCING12017-05-22
4ABC123GFHD01-1014679898VNTRVariable Number Tandem RepeatsNUMBER OF CAG REPEATS232323HTTGENE WITH PROTEIN PRODUCTc.52_54LRG_763t12gDNASEQUENCING12017-05-22
5ABC123GFHD01-1015679898VNTRVariable Number Tandem RepeatsNUCLEOTIDE SEQUENCECAG[44]CAACAG[2]CCGCCA[1]CCG[7]CCT[2]CAG[44]CAACAG[2]CCGCCA[1]CCG[7]CCT[2]
HTTGENE WITH PROTEIN PRODUCTc.52_153LRG_763t11gDNASEQUENCING12017-05-22
6ABC123GFHD01-1016679898VNTRVariable Number Tandem RepeatsNUCLEOTIDE SEQUENCECAG[23]CAACAG[2]CCGCCA[1]CCG[7]CCT[2]CAG[23]CAACAG[2]CCGCCA[1]CCG[7]CCT[2]
HTTGENE WITH PROTEIN PRODUCTc.52_153LRG_763t12gDNASEQUENCING12017-05-22
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