Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
Comment: Updated dataset names ADCVNTP=> ADEFNTP and ADCVCMR=>ADEFMRI

...

Definexmltable
Multipletrue
LevelDataset
PurposeAnalysis

Dataset Name

Description

Class

Structure

Purpose

Keys

Location

Documentation

ADSL

Subject-Level Analysis Dataset

SUBJECT LEVEL ANALYSIS DATASET

One record per subject.

AnalysisUSUBJIDadsl.xptADSL.SAS
ADEFNTPCV MRI EF and NT-proBNP Analysis

BASIC DATA STRUCTURE

One record per subject per analysis visit per parameter.AnalysisUSUBJID, AVISITN, PARAMNadefntp.xpt

ADEFNTP.SAS/SAPSee SAP, Section X.X.X

Jira
showSummaryfalse
serverIssue Tracker (JIRA)
serverId85506ce4-3cb3-3d91-85ee-f633aaaf4a45
keyTAUGDMDCIS-4

ADEFMRICV MRI Ejection Fraction Analysis

BASIC DATA STRUCTURE

One record per subject per analysis visit per parameter.AnalysisUSUBJID, AVISITN, PARAMNadcvcmradefmri.xpt

See SAP, Section X.X.XADEFMRI/SAP

ADSL

The ADSL contains subject characteristics and covariates that are important for analyses. Stratification variables can be created in the ADSL to subset the data. More than one SDTM dataset may be used as input to the ADSL. This is a simplified example ADSL dataset; the ADaMIG should be referenced for additional variables.

Jira
showSummaryfalse
serverIssue Tracker (JIRA)
serverId85506ce4-3cb3-3d91-85ee-f633aaaf4a45
keyTAUGDMDCIS-2

...

Dataset wrap
Showtrue
NameADSL
Dataset2
tableidadsl
RowSTUDYIDUSUBJIDBRTHDTAAGEAGEAGEUSEXRACETRTSDTRFICDTDTHDTDTHFLTRT01PITTFLACEINHFLHEIGHTSCWEIGHTSCBSASC
1DMD-EFLGEDMD-EF-01-10107FEB201012.312YEARSMBLACK OR AFRICAN AMERICAN16JUN202216JUN2022

Drug AYY119200.82
2DMD-EFLGEDMD-EF-01-10101MAY200814.114YEARSMASIAN13JUN202213JUN2022

Drug AYY115300.95
3DMD-EFLGEDMD-EF-01-10110JUL200319.019YEARSMNATIVE HAWAIIAN OR OTHER PACIFIC ISLANDER

15JUL2022

Jira
showSummaryfalse
serverIssue Tracker (JIRA)
serverId85506ce4-3cb3-3d91-85ee-f633aaaf4a45
keyTAUGDMDCIS-7

15JUL2022

Drug BYN140451.30
4DMD-EFLGEDMD-EF-01-10115JAN199923.723YEARSMWHITE06SEP202206SEP202223NOV2023YDrug BYY132421.21

...

ADEFNTP

The ADCVNTP ADEFNTP includes tests pertinent to analyses. The records from CV (CVTESTCD = "LVEF_C" and "RVEF_C") and the records from LB (LBTESTCD = "BNPPRONT") were selected. Many lab draws may occur throughout the year, but only those linked to a specific visit were included. By subsetting the LB dataset by LBLNKID not missing, laboratory data that aligns with CV data can be filtered out and sorted using USUBJID and VISIT. If LBLNKID is not available or the LB dataset does not contain VISIT, a windowing strategy could be used to select the laboratory draw closest to that visit using date of lab draw (LB.LBDTC.).

...

Dataset wrap
Showtrue
Nameadcvntp
Dataset2
tableidadcvntpadefntp
RowSTUDYIDUSUBJIDAAGEAGEUSEXRACETRT01PTRT01AITTFLHEIGHTWEIGHTBSAACEINHFLPARAMPARAMCDPARAMNAVALAVISITAVISITNVISITADTABLFLBASECHGPCHGCHGCAT1SRCDOMSRCVARSRCSEQ
1DMD-EFLGEDMD-EF-01-10112.3YEARSMBLACK OR AFRICAN AMERICANDrug ADrug AY119200.82YLeft Ventricular Ejection Fraction, Cal (%)LVEF_C167Visit 1 (Baseline)1VISIT 116MAY2022Y67


CVCVTESTCD
Jira
showSummaryfalse
serverIssue Tracker (JIRA)
serverId85506ce4-3cb3-3d91-85ee-f633aaaf4a45
keyTAUGDMDCIS-13
3
2DMD-EFLGEDMD-EF-01-10112.3YEARSMBLACK OR AFRICAN AMERICANDrug ADrug AY119200.82YRight Ventricular Ejection Fraction, Cal (%)RVEF_C274Visit 1 (Baseline)1VISIT 116MAY2022Y74


CVCVTESTCD7
3DMD-EFLGEDMD-EF-01-10112.3YEARSMBLACK OR AFRICAN AMERICANDrug ADrug AY119200.82YN-Terminal ProB-type Natriuretic Peptide (ng/L)BNPPRONT340Visit 1 (Baseline)1VISIT 116MAY2022Y40


LBLBTESTCD1
4DMD-EFLGEDMD-EF-01-10112.3YEARSMBLACK OR AFRICAN AMERICANDrug ADrug AY132321.08YLeft Ventricular Ejection Fraction, Cal (%)LVEF_C160Visit 6 (1 Year)6VISIT 606APR2023
67-7-10.447761Decline >=5.0%CVCVTESTCD11
5DMD-EFLGEDMD-EF-01-10112.3YEARSMBLACK OR AFRICAN AMERICANDrug ADrug AY132321.08YRight Ventricular Ejection Fraction, Cal (%)RVEF_C261Visit 6 (1 Year)6VISIT 606APR2023
74-13-17.567568Decline >=5.0%CVCVTESTCD15
6DMD-EFLGEDMD-EF-01-10112.3YEARSMBLACK OR AFRICAN AMERICANDrug ADrug AY132321.08Y

N-Terminal ProB-type Natriuretic Peptide (ng/L)

BNPPRONT3900Visit 6 (1 Year)6VISIT 606APR2023
408602,150Increase >100 ng/LLBLBTESTCD2

...

ADEFMRI

The ADCVMR is an efficacy analysis dataset with only a few records for more complex modeling of changes in ejection fraction, plus the proB-type test results. It is an ADaM Basic Data Structure (BDS) dataset

Jira
showSummaryfalse
serverIssue Tracker (JIRA)
serverId85506ce4-3cb3-3d91-85ee-f633aaaf4a45
keyTAUGDMDCIS-15
, with additional variables added from ADCVNTPADEFNTP dataset.

The dataset can provide multivariate analyses

Jira
showSummaryfalse
serverIssue Tracker (JIRA)
serverId85506ce4-3cb3-3d91-85ee-f633aaaf4a45
keyTAUGDMDCIS-14
by taking the lab tests of interest (PARAMCD = "BNPPRONT") or other analysis datasets, and merging variables of interest with the ADCVNTP ADEFNTP dataset. This summary dataset is created from other ADaM datasets and only variables used in the analysis are kept.

Definexmltable
DatasetADCVCMR
LevelVariable
PurposeAnalysis
NameVariable
Variable NameVariable LabelTypeCodelist/Controlled TermsSource/Derivation/Comment
STUDYIDStudy Identifiertext

Predecessor: ADCVNTPADEFNTP.STUDYID

USUBJIDUnique Subject Identifiertext

Predecessor: ADCVNTPADEFNTP.USUBJID

BRTHDTDate of Birthintegerdate9.

Predecessor: ADCVNTPADEFNTP.BRTHDT

AAGEAnalysis Agefloat

Predecessor: ADCVNTPADEFNTP.AAGE

AGEUAge UnittextYEARS

Predecessor: ADCVNTPADEFNTP.AGEU

SEX

Sextext(SEX)

Predecessor: ADCVNTPADEFNTP.SEX

RACE

Racetext(RACE)

Predecessor: ADCVNTPADEFNTP.RACE

TRTSDT

Date of First Exposure to Treatment

Numdate9.Predecessor: ADCVNTPADEFNTP.TRTSDT
TRT01P

Planned Treatment for Period 01

textDrug A; Drug BPredecessor: ADCVNTPADEFNTP.TRT01P

ITTFL

Intent-To-Treat Population Flag

text

Y; N

Predecessor: ADCVNTPADEFNTP.ITTFL

BSABody Surface Area (m2)float


Predecessor: ADCVNTPADEFNTP.BSA

ACEINHFL

ACE Inhibitor Medications Flag

text

Y; N

Predecessor: ADCVNTPADEFNTP.ACEINHFL

BNPPRONT


integer


Derived: BNPPRONT = AVAL where PARAMCD =  ADCVNTPADEFNTP.BNPPRONT, and merge by USUBJID and AVISITN.

Note: There are many ways to add this including transposing the data.

PARAMParametertext

Left Ventricular Ejection Fraction, Cal (%);

Right Ventricular Ejection Fraction, Cal (%)

Predecessor: ADCVNTPADEFNTP.PARAM

PARAMCDParameter Codetext

LVEF_C;

RVEF_C

Predecessor: ADCVNTPADEFNTP.PARAMCD

PARAMNParameter (N)integer


Predecessor: ADCVNTPADEFNTP.PARAMN

AVALAnalysis Valuefloat

Predecessor: ADCVNTPADEFNTP.AVAL

AVISITAnalysis Visittext

Visit 1 (Baseline);

Visit 6 (1 Year)

Predecessor: ADCVNTPADEFNTP.AVISIT

AVISITNAnalysis Visit (N)integer1; 6

Predecessor: ADCVNTPADEFNTP.AVISITN

ADTAnalysis Datefloatdate9.Predecessor: ADCVNTPADEFNTP.ADT
ABLFLBaseline Record FlagtextYPredecessor: ADCVNTPADEFNTP.ABLFL
BASEBaseline Valuefloat
Predecessor: ADCVNTPADEFNTP.BASE
CHGChange from Baselinefloat
Predecessor: ADCVNTPADEFNTP.CHG
PCHGPercent Change from Baselinefloat
Predecessor: ADCVNTPADEFNTP.PCHG
CHGCAT1Change from Baseline Category 1text

Decline >=5.0%;

Decline <5.0%;

Increase >100 ng/L

Predecessor: ADCVNTPADEFNTP.CHGCAT1
Dataset wrap
Showtrue
Nameadcvcmradefmri
Dataset2
tableidadcvcmradefmri
RowSTUDYIDUSUBJIDBRTHDTTRT01PAAGEAGUSEXRACETRT01AITTFLBSAACEINHFLBNPPRONTPARAMPARAMCDPARAMNAVALAVISITAVISITNADTABLFLBASECHGPCHGCHGCAT1
1DMD-EFLGEDMD-EF-01-10107FEB2010Drug A12.3YEARSMBLACK OR AFRICAN AMERICANDrug AY0.82Y40Left Ventricular Ejection Fraction, Cal (%)LVEF_C170Visit 1 (Baseline)116MAY2022Y70


2DMD-EFLGEDMD-EF-01-10107FEB2010Drug A12.3YEARSMBLACK OR AFRICAN AMERICANDrug AY0.82Y40Right Ventricular Ejection Fraction, Cal (%)RVEF_C275Visit 1 (Baseline)116MAY2022Y75


3DMD-EFLGEDMD-EF-01-10107FEB2010Drug A12.3YEARSMBLACK OR AFRICAN AMERICANDrug AY1.08Y900Left Ventricular Ejection Fraction, Cal (%)LVEF_C165Visit 6 (1 Year)606APR2023
70-5-10.447761Decline >=5.0%
4DMD-EFLGEDMD-EF-01-10107FEB2010Drug A12.3YEARSMBLACK OR AFRICAN AMERICANDrug AY1.08Y900Right Ventricular Ejection Fraction, Cal (%)RVEF_C270Visit 6 (1 Year)606APR2023
75-5-17.567568Decline >=5.0%

...