Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

This example dataset shows the findings of a cardiac magnetic resonance imaging procedure related to late gadolinium enhancement. Different levels of granularity are shown with the various tests and details that might be represented. The research requirements will determine what level of granularity is needed. For example, a study using LGE may require LGE test in their data without the detail of the analysis method. Alternatively, researchers may be interested in understanding if the assessments were done visually or with quantitative methods. If the study includes an assessment of each segment such as with the Segmental Late Gadolinium Enhancement Percentage, there may be interest in representing the quantitative analysis method of "Full-width half maximum" which is one of the types of analysis that may be done. The example provides how to represent this type of information if the researchers are interested in this type of information for the study data. https://jcmr-online.biomedcentral.com/articles/10.1186/1532-429X-16-45

LGE assessments may be done on each of the cardiovascular segments as shown in Figure 1. https://www.ahajournals.org/doi/full/10.1161/hc0402.102975.

...

This example includes example datasets to reflect how the CMR procedure and the contrast would be represented in the data.The Procedures (PR) domain represents diagnostic, preventive, and therapeutic activity. The example PR dataset shows the cardiac magnetic resonance imaging with two different MRI machines, using the SPDEVID to represent the imaging device identifier information provided in the DI dataset below. The ANMETH variable describes the analysis method applied to obtain a summarized result. Analysis method describes the method of secondary processing applied to a complex observation result (e.g., an image, a genetic sequence) which in this case applies to the CMR imaging.

TO DO - Describe the analysis method for LGE - three different methods:

...

There are machine-centric analysis methods inherit to the type of machine (full-width half maximum

...

, 5 standard deviations

...

, 6 standard deviations). https://jcmr-online.biomedcentral.com/articles/10.1186/1532-429X-12-21 These may be of interest for the study and would be represented using the ANMETH variable.

Dataset wrap
Namepr
Rowcaps

Row 1:

Shows a cardiac MRI for participant 101.

Row 2:

Shows a cardiac MRI for participant 202 with a different MRI machine. The time of the procedure was not available so only the date is shown in the PRSTDTC variable.

Dataset2
Row

STUDYID

DOMAIN

USUBJID

SPDEVID

PRSEQ

PRREFID

PRLNKID

PRTRT

PRFAST

PRSTDTC

1

DMD-EFLGE

PR

101

ABC001

1

12345678

04

CARDIAC MAGNETIC RESONANCE IMAGING

Y

2023-07-01T09:15:00

2

DMD-EFLGE

PR

202

ABC002

1

98765432

05

CARDIAC MAGNETIC RESONANCE IMAGING

N

2023-07-05

...