Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

Expand
titleei.xpt Entity Identifiers (dm-like)
  • Entity IDs are unique within the assay (and a study can have many assays)
  • Replicates vs. Run 
    • need planned (ei.xpt) separate from the actual (gt.xpt)
    • If tests run at the same time, they are replicates and are assigned the same RUNID
    • If tests are run at separate times, they are runs and the RUNIDs are distinct
  • Different runs would be expected to have different ENID and GTDTC values. In ei.xpt, these are distinguished by different RUNID values.
  • Entities that are replicates of each other would be expected to
    • have different ENID values
    • be in the same trial set (SETCD values)
    • have the same RUNID values


RowSTUDYIDASSAYIDDOMAINENID (Entity ID)SETCD (from TX)

RUNID 

REPLCTID

(Replicate Number)

PLATEID (Plate ID)

COLID

(Column number)

ROWID (Row  number)RFSTDTCRFENDTCRFXSTDTCRFXENDTCRFCSTDTCRFCENDTC

123MNvitEI1-8-3A1

1


1-8-3 (plate - col- row)










123MNvitEI2-8-3A1

2













Expand
titlegt.xpt (similar to LB)

A1:


A2:                                     Image Removed Image Added


  • Different runs would be expected to have different ENID and GTDTC values. In ei.xpt, these are distinguished by different RUNID values.
RowSTUDYIDASSAYIDDOMAIN
SETCD
ENIDGTSEQGTTESTCDGTTESTGTCELLEV
(cells evaluated)
GTORRESGTORRESUGTSTRESCGTSTRESNGTSTRESUGTDTC
1123MNvitGT
A1
1-8-31RICCRelative Increase in Cell Count1540%00%2022-05-25
2123MNvitGT
A1
1-8-32RCCRelative Cell Count1540%00%2022-05-25
3123MNvitGT
A1
1-8-33RPDRelative Population Doubling1540%00%2022-05-25
4123MNvitGT
A1
1-8-34MNCELLSMicronucleated Cells220515Cells1515Cells2022-05-25
5123MNvitGT
A1
1-8-35MNCELLSMicronucleated Cells247413Cells1313Cells2022-05-25
6123MNvitGT
A1
1-8-36MNCELLSMicronucleated Cells275817Cells1717Cells2022-05-25
7123MNvitGT
A1
1-8-37MNCELLSMicronucleated Cells266912Cells1212Cells2022-05-25
8123MNvitGT
A1
1-8-38AVGRELAverage Relative MN Frequency
0.57%0.570.57%2022-05-25
9123MNvitGT
A2

1RICCRelative Increase in Cell Count13415.7%15.715.7%2022-05-25
10123MNvitGT
A2

2RCCRelative Cell Count13413.0%13.013.0%2022-05-25
11123MNvitGT
A2

3RPDRelative Population Doubling1347.9%7.97.9%2022-05-25
12123MNvitGT
A2

4MNCELLSMicronucleated Cells326620Cells2020Cells2022-05-25
13123MNvitGT
A2

5MNCELLSMicronucleated Cells219017Cells1717Cells2022-05-25
14123MNvitGT
A2

6MNCELLSMicronucleated Cells275813Cells1313Cells2022-05-25
15123MNvitGT
A2

7MNCELLSMicronucleated Cells271421Cells2121Cells2022-05-25
16123MNvitGT
A2

8AVGRELAverage Relative MN Frequency
0.66%0.660.66%2022-05-25
...