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This example shows findings from an assessment of the number of mutations within a tumor genome with the purpose of determining likely response to immunotherapy. (Need to add description here)
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Dataset2 |
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STUDYID | DOMAIN | USUBJID | SPDEVID | NHOID | GFSEQ | GFGRPID | GFREFID | GFSPID | GFLNKID | GFLNKGRP | GFTESTCD | GFTEST | GFTSTDTL | GFCAT | GFSCAT | GFORRES | GFORRESU | GFORREF | GFSTRESC | GFSTRESN | GFSTRESU | GFSTREFC | GFSTREFN | GFRESCAT | GFINHERT | GFGENREF | GFCHROM | GFSYM | GFSYMTYP | GFGENLOC | GFGENSR | GFSEQID | GFPVRID | GFCOPYID | GFSTAT | GFREASND | GFXFN | GFNAM | GFSPEC | GFMETHOD | GFRUNID | GFANMETH | GFBLFL | GFDRVFL | GFLLOQ | GFREPNUM | VISITNUM | VISIT | VISITDY | GFDTC | GFDY | GFTPT | GFTPTNUM | GFELTM | GFTPTREF | GFRFTDTC | ABC-123 | GF | ABC123-45-001 | ACME 500 GENE PANEL |
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| 96757855 |
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| TMB | Tumor Mutation Burden | NORMALIZED NUMBER OF SEQUENCE VARIANTS |
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| 8.83 | /MBP |
| 8.83 | 8.83 | /MBP |
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| GRCh37.75 |
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| ACME Genetics Inc. | ctDNA | NEXT GENERATION TARGETED SEQUENCING |
| Uniform TMB Calculation Method Merino et al 2020 FORMULA |
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| 1 | SCREENING | <ADD HERE> | <ADD HERE> | <ADD HERE> |
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| ABC-123 | GF | ABC123-45-001 | ACME 500 GENE PANEL |
| 2 |
| 96757855 |
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| TMB | Tumor Mutation Burden | VARIANT SEQUENCE BURDEN INTERPRETATION |
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| intermediate |
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| intermediate |
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| GRCh37.75 |
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| ACME Genetics Inc. | ctDNA | NEXT GENERATION TARGETED SEQUENCING |
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| 1 | SCREENING | <ADD HERE> | <ADD HERE> | <ADD HERE> |
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| ABC-123 | GF | ABC123-45-001 |
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| 3 |
| 78975864 |
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| TMB | Tumor Mutation Burden | NUMBER OF SEQUENCE VARIANTS |
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| 497 |
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| 497 | 497 |
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| GRCh37.75 |
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| Genetics Lab Plus | DNA | WHOLE EXOME SEQUENCING |
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| 1 | SCREENING | <ADD HERE> | <ADD HERE> | <ADD HERE> |
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